spark取得lzo压缩文件报错java.lang.ClassNotFoundException该怎么办
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恩,这个问题,反正是我从来没有注意的问题,但今天还是写出来吧
配置信息
hadoop core-site.xml配置
io.compression.codecs org.apache.hadoop.io.compress.GzipCodec,org.apache.hadoop.io.compress.DefaultCodec,com.hadoop.compression.lzo.LzoCodec,com.hadoop.compression.lzo.LzopCodec,org.apache.hadoop.io.compress.BZip2Codec,org.apache.hadoop.io.compress.LzmaCodec 12345678910 io.compression.codec.lzo.class com.hadoop.compression.lzo.LzoCodec
io compression codec 是lzo
spark-env.sh配置
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/home/cluster/apps/hadoop/lib/nativeexport SPARK_LIBRARY_PATH=$SPARK_LIBRARY_PATH:/home/cluster/apps/hadoop/lib/nativeexport SPARK_CLASSPATH=$SPARK_CLASSPATH:/home/cluster/apps/hadoop/share/hadoop/yarn/:/home/cluster/apps/hadoop/share/hadoop/yarn/lib/:/home/cluster/apps/hadoop/share/hadoop/common/:/home/cluster/apps/hadoop/share/hadoop/common/lib/:/home/cluster/apps/hadoop/share/hadoop/hdfs/:/home/cluster/apps/hadoop/share/hadoop/hdfs/lib/:/home/cluster/apps/hadoop/share/hadoop/mapreduce/:/home/cluster/apps/hadoop/share/hadoop/mapreduce/lib/:/home/cluster/apps/hadoop/share/hadoop/tools/lib/:/home/cluster/apps/spark/spark-1.4.1/lib/123
操作信息
启动 spark-shell
执行如下代码
val lzoFile = sc.textFile("/tmp/data/lzo/part-m-00000.lzo")
lzoFile.count12具体报错信息
java.lang.RuntimeException: Error in configuring object at org.apache.hadoop.util.ReflectionUtils.setJobConf(ReflectionUtils.java:109) at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:75) at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133) at org.apache.spark.rdd.HadoopRDD.getInputFormat(HadoopRDD.scala:190) at org.apache.spark.rdd.HadoopRDD.getPartitions(HadoopRDD.scala:203) at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219) at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217) at scala.Option.getOrElse(Option.scala:120) at org.apache.spark.rdd.RDD.partitions(RDD.scala:217) at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32) at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219) at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217) at scala.Option.getOrElse(Option.scala:120) at org.apache.spark.rdd.RDD.partitions(RDD.scala:217) at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32) at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219) at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217) at scala.Option.getOrElse(Option.scala:120) at org.apache.spark.rdd.RDD.partitions(RDD.scala:217) at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:32) at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:219) at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:217) at scala.Option.getOrElse(Option.scala:120) at org.apache.spark.rdd.RDD.partitions(RDD.scala:217) at org.apache.spark.SparkContext.runJob(SparkContext.scala:1781) at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:885) at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:147) at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:108) at org.apache.spark.rdd.RDD.withScope(RDD.scala:286) at org.apache.spark.rdd.RDD.collect(RDD.scala:884) at org.apache.spark.sql.execution.SparkPlan.executeCollect(SparkPlan.scala:105) at org.apache.spark.sql.hive.HiveContext$QueryExecution.stringResult(HiveContext.scala:503) at org.apache.spark.sql.hive.thriftserver.AbstractSparkSQLDriver.run(AbstractSparkSQLDriver.scala:58) at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.processCmd(SparkSQLCLIDriver.scala:283) at org.apache.hadoop.hive.cli.CliDriver.processLine(CliDriver.java:423) at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver$.main(SparkSQLCLIDriver.scala:218) at org.apache.spark.sql.hive.thriftserver.SparkSQLCLIDriver.main(SparkSQLCLIDriver.scala) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:665) at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:170) at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:193) at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:112) at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala) Caused by: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.apache.hadoop.util.ReflectionUtils.setJobConf(ReflectionUtils.java:106) ... 45 more Caused by: java.lang.IllegalArgumentException: Compression codec com.hadoop.compression.lzo.LzoCodec not found. at org.apache.hadoop.io.compress.CompressionCodecFactory.getCodecClasses(CompressionCodecFactory.java:135) at org.apache.hadoop.io.compress.CompressionCodecFactory.(CompressionCodecFactory.java:175) at org.apache.hadoop.mapred.TextInputFormat.configure(TextInputFormat.java:45) ... 50 more Caused by: java.lang.ClassNotFoundException: Class com.hadoop.compression.lzo.LzoCodec not found at org.apache.hadoop.conf.Configuration.getClassByName(Configuration.java:1803) at org.apache.hadoop.io.compress.CompressionCodecFactory.getCodecClasses(CompressionCodecFactory.java:128) ... 52 more 123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263
然后如何解决呢
后来有点怀疑 hadoop core-site.xml配置格式问题,然后让同事帮我跟进hadoop 源码,可以肯定不是hadoop问题
然后 我就想了想,之前也遇到类似的问题,我是这样配置spark-env.sh
export SPARK_LIBRARY_PATH=$SPARK_LIBRARY_PATH:/home/stark_summer/opt/hadoop/hadoop-2.3.0-cdh6.1.0/lib/native/Linux-amd64-64/*:/home/stark_summer/opt/hadoop/hadoop-2.3.0-cdh6.1.0/share/hadoop/common/hadoop-lzo-0.4.15-cdh6.1.0.jar:/home/stark_summer/opt/spark/spark-1.3.1-bin-hadoop2.3/lib/* export SPARK_CLASSPATH=$SPARK_CLASSPATH:/home/stark_summer/opt/hadoop/hadoop-2.3.0-cdh6.1.0/share/hadoop/common/hadoop-lzo-0.4.15-cdh6.1.0.jar:/home/stark_summer/opt/spark/spark-1.3.1-bin-hadoop2.3/lib/*12
这个配置是之前fix这个问题的,但是 是很久之前的事情,我早已经忘了,所以这是平日写博客的好处,把每次遇到的问题全部记录下来
恩?如果我指定具体.jar包,那就没问题了,但是在spark中 难道必须要用 * 来指定某个目录下的所有jar么?那这个跟hadoop还真不一样呢,在hadoop中 我们要指定某个目录下的jar包,都是/xxx/yyy/lib/
而spark必须要求/xxx/yyy/lib/*,才能加载到这个目录下的jar包,否则就会包如上错误
修改后的spark-env.sh配置文件
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/home/cluster/apps/hadoop/lib/nativeexport SPARK_LIBRARY_PATH=$SPARK_LIBRARY_PATH:/home/cluster/apps/hadoop/lib/nativeexport SPARK_CLASSPATH=$SPARK_CLASSPATH:/home/cluster/apps/hadoop/share/hadoop/yarn/*:/home/cluster/apps/hadoop/share/hadoop/yarn/lib/*:/home/cluster/apps/hadoop/share/hadoop/common/*:/home/cluster/apps/hadoop/share/hadoop/common/lib/*:/home/cluster/apps/hadoop/share/hadoop/hdfs/*:/home/cluster/apps/hadoop/share/hadoop/hdfs/lib/*:/home/cluster/apps/hadoop/share/hadoop/mapreduce/*:/home/cluster/apps/hadoop/share/hadoop/mapreduce/lib/*:/home/cluster/apps/hadoop/share/hadoop/tools/lib/*:/home/cluster/apps/spark/spark-1.4.1/lib/*123
当再次执行上述代码就没有问题了
但是 但是 但是
如果 我把 /home/cluster/apps/hadoop/lib/native 改成/home/cluster/apps/hadoop/lib/native/*
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/home/cluster/apps/hadoop/lib/native/*export SPARK_LIBRARY_PATH=$SPARK_LIBRARY_PATH:/home/cluster/apps/hadoop/lib/native/*export SPARK_CLASSPATH=$SPARK_CLASSPATH:/home/cluster/apps/hadoop/share/hadoop/yarn/*:/home/cluster/apps/hadoop/share/hadoop/yarn/lib/*:/home/cluster/apps/hadoop/share/hadoop/common/*:/home/cluster/apps/hadoop/share/hadoop/common/lib/*:/home/cluster/apps/hadoop/share/hadoop/hdfs/*:/home/cluster/apps/hadoop/share/hadoop/hdfs/lib/*:/home/cluster/apps/hadoop/share/hadoop/mapreduce/*:/home/cluster/apps/hadoop/share/hadoop/mapreduce/lib/*:/home/cluster/apps/hadoop/share/hadoop/tools/lib/*:/home/cluster/apps/spark/spark-1.4.1/lib/*123
尼玛 就会报错如下:
spark.repl.class.uri=http://10.32.24.78:52753) error [Ljava.lang.StackTraceElement;@4efb0b1f2015-09-11 17:52:02,357 ERROR [main] spark.SparkContext (Logging.scala:logError(96)) - Error initializing SparkContext.java.lang.reflect.InvocationTargetException at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57) at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) at java.lang.reflect.Constructor.newInstance(Constructor.java:526) at org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:68) at org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:60) at org.apache.spark.scheduler.EventLoggingListener.(EventLoggingListener.scala:69) at org.apache.spark.SparkContext. (SparkContext.scala:513) at org.apache.spark.repl.SparkILoop.createSparkContext(SparkILoop.scala:1017) at $line3.$read$$iwC$$iwC. ( :9) at $line3.$read$$iwC. ( :18) at $line3.$read. ( :20) at $line3.$read$. ( :24) at $line3.$read$. ( ) at $line3.$eval$. ( :7) at $line3.$eval$. ( ) at $line3.$eval.$print( ) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065) at org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1338) at org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840) at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871) at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819) at org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857) at org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902) at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814) at org.apache.spark.repl.SparkILoopInit$$anonfun$initializeSpark$1.apply(SparkILoopInit.scala:123) at org.apache.spark.repl.SparkILoopInit$$anonfun$initializeSpark$1.apply(SparkILoopInit.scala:122) at org.apache.spark.repl.SparkIMain.beQuietDuring(SparkIMain.scala:324) at org.apache.spark.repl.SparkILoopInit$class.initializeSpark(SparkILoopInit.scala:122) at org.apache.spark.repl.SparkILoop.initializeSpark(SparkILoop.scala:64) at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1$$anonfun$apply$mcZ$sp$5.apply$mcV$sp(SparkILoop.scala:974) at org.apache.spark.repl.SparkILoopInit$class.runThunks(SparkILoopInit.scala:157) at org.apache.spark.repl.SparkILoop.runThunks(SparkILoop.scala:64) at org.apache.spark.repl.SparkILoopInit$class.postInitialization(SparkILoopInit.scala:106) at org.apache.spark.repl.SparkILoop.postInitialization(SparkILoop.scala:64) at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:991) at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945) at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945) at scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135) at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$process(SparkILoop.scala:945) at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059) at org.apache.spark.repl.Main$.main(Main.scala:31) at org.apache.spark.repl.Main.main(Main.scala) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:665) at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:170) at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:193) at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:112) at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala) Caused by: java.lang.IllegalArgumentException at org.apache.spark.io.SnappyCompressionCodec. (CompressionCodec.scala:155) ... 56 more1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162
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